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Cofit
Protein
Homologs
Top cofit genes for GFF6562 from
Variovorax sp. SCN45
T1SS secreted agglutinin RTX
SEED: T1SS secreted agglutinin RTX
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6319
ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.62
2
GFF3698
ATP-dependent, 3'-5' DNA helicase with strand annealing activity
no
0.60
3
GFF4396
Mobile element protein
no
0.59
4
GFF5455
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
no
0.58
5
GFF6746
dolichyl-phosphate-mannose-protein mannosyltransferase family protein
no
0.58
6
GFF7243
HtrA protease/chaperone protein
no
0.57
7
GFF5295
Ferrichrome-iron receptor
no
0.57
8
GFF7302
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
no
0.57
9
GFF2828
Uncharacterized protein CC_3059
no
0.56
10
GFF6173
Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B
no
0.56
11
GFF5409
FIG00576366: hypothetical protein
no
0.55
12
GFF3179
hypothetical protein
no
0.54
13
GFF5496
BUG/TctC family periplasmic protein
no
0.54
14
GFF3560
hypothetical protein
no
0.54
15
GFF4955
hypothetical protein
no
0.54
16
GFF2197
Type I secretion system ATPase, LssB family LapB
no
0.53
17
GFF6424
Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
no
0.53
18
GFF5668
Uncharacterized MFS-type transporter
no
0.53
19
GFF6219
hypothetical protein
no
0.52
20
GFF304
Ubiquinone/menaquinone biosynthesis methyltransferase family protein
no
0.52
Or look for
negative cofitness