Top cofit genes for GFF6543 from Variovorax sp. SCN45

Transcriptional regulator, LysR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF153		ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines)	no	0.57
2	GFF7076		no description	no	0.56
3	GFF5549		Hydrogen peroxide-inducible genes activator => OxyR	no	0.55
4	GFF114		ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)	no	0.54
5	GFF4991		Polyhydroxyalkanoate granule-associated protein PhaF	no	0.52
6	GFF2547		Type I antifreeze protein	no	0.52
7	GFF2072		Phosphate starvation-inducible protein PhoH, predicted ATPase	no	0.51
8	GFF4840		FIG00956188: hypothetical protein	no	0.50
9	GFF5259		Na+/solute symporter	no	0.49
10	GFF2914		Glutamine ABC transporter, ATP-binding protein GlnQ	no	0.48
11	GFF3442		RidA/YER057c/UK114 superfamily protein	no	0.48
12	GFF162		hypothetical protein	no	0.48
13	GFF7083		Mobile element protein	no	0.48
14	GFF2630		Ligand-binding SRPBCC domain protein family	no	0.47
15	GFF2471		Outer membrane porin protein 32 precursor	no	0.46
16	GFF5381		Transcriptional regulator, LysR family	no	0.46
17	GFF5303		Tricarboxylate transport transcriptional regulator TctD	no	0.46
18	GFF361		3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / Enoyl CoA hydratase (EC 4.2.1.17)	no	0.46
19	GFF3581		Transcriptional regulator, ArsR family	no	0.46
20	GFF1330		UPF0061 protein YdiU	no	0.46

Or look for negative cofitness