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  • Top cofit genes for GFF6538 from Variovorax sp. SCN45

    Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
    SEED: Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1215 Oligopeptide transport ATP-binding protein @ Glutathione ABC transporter, ATP-binding protein GsiA 0.28 0.53
    2 GFF4379 y4eB gene in pNGR234a homolog no 0.45
    3 GFF3994 hypothetical protein no 0.45
    4 GFF7185 no description no 0.43
    5 GFF2218 FIG00455441: hypothetical protein no 0.43
    6 GFF4547 no description no 0.43
    7 GFF5853 Type I secretion system ATPase, LssB family LapB no 0.43
    8 GFF2866 Uncharacterized MFS-type transporter no 0.42
    9 GFF4597 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.42
    10 GFF1544 Two-component system sensor histidine kinase/response regulator hybrid no 0.40
    11 GFF4686 Copper-sensing two-component system response regulator CusR no 0.39
    12 GFF60 GDP-L-fucose synthetase (EC 1.1.1.271) no 0.39
    13 GFF2731 hypothetical protein no 0.39
    14 GFF5626 Patatin 0.36 0.39
    15 GFF2953 Transcriptional regulator, AraC family no 0.39
    16 GFF1131 putative fatty acid desaturase no 0.38
    17 GFF5958 FIG00537018: hypothetical protein no 0.38
    18 GFF6874 hypothetical protein no 0.38
    19 GFF3729 Transcriptional regulator, AraC family 0.25 0.38
    20 GFF515 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) 0.37 0.37

    Or look for negative cofitness