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  • Top cofit genes for GFF6522 from Variovorax sp. SCN45

    Zinc-regulated outer membrane receptor
    SEED: Zinc-regulated outer membrane receptor
    KEGG: iron complex outermembrane recepter protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5052 FAD-dependent oxidoreductase SPO0682 no 0.53
    2 GFF3416 Alkanesulfonates transport system permease protein no 0.52
    3 GFF6126 putative membrane protein no 0.49
    4 GFF195 RidA/YER057c/UK114 superfamily, group 1 no 0.49
    5 GFF924 hypothetical protein no 0.48
    6 GFF1332 no description no 0.48
    7 GFF5259 Na+/solute symporter no 0.48
    8 GFF2224 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    9 GFF4122 hypothetical protein no 0.47
    10 GFF5754 Flagellar cap protein FliD no 0.47
    11 GFF6567 hypothetical protein no 0.46
    12 GFF6137 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6 no 0.46
    13 GFF1358 Transcriptional regulator, LysR family 0.14 0.46
    14 GFF6489 no description no 0.46
    15 GFF1636 Non-ribosomal peptide synthetase modules, pyoverdine @ Siderophore biosynthesis non-ribosomal peptide synthetase modules no 0.46
    16 GFF5271 Transcriptional regulator, LysR family no 0.46
    17 GFF4268 Uncharacterized MFS-type transporter 0.38 0.45
    18 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.45
    19 GFF6309 Secreted and surface protein containing fasciclin-like repeats no 0.45
    20 GFF6784 D-amino acid dehydrogenase (EC 1.4.99.6) no 0.45

    Or look for negative cofitness