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  • Top cofit genes for GFF651 from Variovorax sp. SCN45

    Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)
    SEED: Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2563 Two-component system sensor histidine kinase no 0.79
    2 GFF3624 Putative transmembrane protein no 0.76
    3 GFF236 Two-component transcriptional response regulator receiver domain no 0.75
    4 GFF4790 Nudix-related transcriptional regulator NrtR no 0.74
    5 GFF3621 Magnesium and cobalt transport protein CorA no 0.69
    6 GFF649 no description no 0.68
    7 GFF3625 Ferredoxin, 2Fe-2S no 0.66
    8 GFF3619 no description no 0.65
    9 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 no 0.61
    10 GFF371 RNA-binding protein YhbY 0.81 0.59
    11 GFF3616 2-hydroxychromene-2-carboxylate isomerase family protein no 0.57
    12 GFF3618 Transcriptional regulator, LysR family no 0.56
    13 GFF2252 RNA-2',3'-PO4:RNA-5'-OH ligase no 0.56
    14 GFF4626 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL no 0.56
    15 GFF5076 hypothetical protein no 0.52
    16 GFF4625 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.33) no 0.51
    17 GFF2356 RNase adapter protein RapZ 0.44 0.50
    18 GFF6022 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) no 0.49
    19 GFF3627 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.32 0.49
    20 GFF372 PMID: 11481431 no 0.48

    Or look for negative cofitness