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  • Top cofit genes for GFF6506 from Variovorax sp. SCN45

    DNA-binding protein HU-beta
    SEED: DNA-binding protein HU-beta
    KEGG: DNA-binding protein HU-beta

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4114 hypothetical protein no 0.55
    2 GFF7413 no description no 0.52
    3 GFF3612 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.52
    4 GFF6823 BUG/TctC family periplasmic protein no 0.51
    5 GFF4239 Mll5186 protein no 0.50
    6 GFF3381 Broad-specificity amino acid ABC transporter, substrate-binding protein no 0.48
    7 GFF5194 L-arabinose ABC transporter, substrate-binding protein AraF no 0.47
    8 GFF5819 no description no 0.46
    9 GFF5511 FIG000875: Thioredoxin domain-containing protein EC-YbbN no 0.46
    10 GFF4166 Cytidine deaminase (EC 3.5.4.5) no 0.45
    11 GFF2906 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) no 0.45
    12 GFF6849 MotA/TolQ/ExbB proton channel family protein no 0.45
    13 GFF3956 no description no 0.45
    14 GFF6155 Aerobic carbon monoxide dehydrogenase (quinone), large chain (EC 1.2.5.3) no 0.44
    15 GFF1102 Uncharacterized oxidoreductase YdgJ no 0.44
    16 GFF496 Squalene synthase (EC 2.5.1.21) no 0.44
    17 GFF6592 hypothetical protein no 0.44
    18 GFF313 FIG027190: Putative transmembrane protein no 0.44
    19 GFF6501 Uncharacterized MFS-type transporter no 0.43
    20 GFF1092 Phosphate ABC transporter, substrate-binding protein PstS (TC 3.A.1.7.1) no 0.43

    Or look for negative cofitness