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  • Top cofit genes for GFF650 from Variovorax sp. SCN45

    Response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF170 Two-component system sensor histidine kinase/response regulator hybrid no 0.61
    2 GFF5054 Homogentisate 1,2-dioxygenase (EC 1.13.11.5) no 0.59
    3 GFF5433 Oxidoreductase, short-chain dehydrogenase/reductase family 0.23 0.56
    4 GFF6964 Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) no 0.56
    5 GFF4532 hypothetical protein no 0.56
    6 GFF3558 hypothetical protein no 0.55
    7 GFF2970 BUG/TctC family periplasmic protein no 0.52
    8 GFF5982 Transcriptional regulator, AcrR family no 0.52
    9 GFF3165 Aerobic cobaltochelatase CobT subunit (EC 6.6.1.2) no 0.52
    10 GFF7218 no description no 0.51
    11 GFF1229 4-hydroxybutyrate coenzyme A transferase no 0.51
    12 GFF6239 Catalase KatE-intracellular protease (EC 1.11.1.6) no 0.50
    13 GFF4871 FIG00457034: hypothetical protein no 0.50
    14 GFF1876 Dihydrodipicolinate synthase family no 0.50
    15 GFF4275 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases no 0.48
    16 GFF5168 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 0.31 0.48
    17 GFF4299 3-ketoacyl-CoA thiolase no 0.48
    18 GFF6118 Transcriptional regulator, MerR family no 0.47
    19 GFF4117 Translation elongation factor Tu no 0.47
    20 GFF5182 no description no 0.47

    Or look for negative cofitness