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  • Top cofit genes for GFF6494 from Variovorax sp. SCN45

    protein of unknown function DUF1232
    SEED: protein of unknown function DUF1232

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6399 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), N-terminal domain no 0.64
    2 GFF2815 Primosomal replication protein N no 0.64
    3 GFF2537 Glycerol-3-phosphate ABC transporter, substrate-binding protein UgpB no 0.63
    4 GFF6070 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) no 0.62
    5 GFF1682 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) no 0.60
    6 GFF6528 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) no 0.60
    7 GFF4888 Mlr6156 protein no 0.59
    8 GFF7156 hypothetical protein no 0.57
    9 GFF4145 transcriptional regulators-like protein no 0.56
    10 GFF2564 Two-component transcriptional response regulator, LuxR family 0.32 0.54
    11 GFF1045 Putative phosphatase 0.20 0.54
    12 GFF7035 UspA no 0.54
    13 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I no 0.53
    14 GFF982 Cell division protein ZapE no 0.53
    15 GFF2841 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) no 0.53
    16 GFF1546 Tripartite tricarboxylate transporter TctA family no 0.53
    17 GFF3956 no description no 0.53
    18 GFF3772 Arginase (EC 3.5.3.1) no 0.53
    19 GFF3431 Glutaryl-CoA dehydrogenase (EC 1.3.8.6) no 0.52
    20 GFF1930 RTX toxin transporter, ATP-binding protein 0.33 0.52

    Or look for negative cofitness