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  • Top cofit genes for GFF6490 from Variovorax sp. SCN45

    Uncharacterized conserved protein YfiP, contains DTW domain
    SEED: FIG074102: hypothetical protein
    KEGG: conserved hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3435 predicted integral membrane protein 0.24 0.58
    2 GFF1265 cAMP-binding protein no 0.55
    3 GFF2827 Bacterioferritin (EC 1.16.3.1) 0.21 0.54
    4 GFF5420 Cyclic pyranopterin monophosphate synthase (EC 4.6.1.17) 0.45 0.52
    5 GFF251 hypothetical protein no 0.51
    6 GFF3572 Efflux ABC transporter, permease protein no 0.51
    7 GFF4169 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.49
    8 GFF3598 TRAP-type C4-dicarboxylate transport system, periplasmic component no 0.49
    9 GFF7269 Altronate dehydratase (EC 4.2.1.7) no 0.48
    10 GFF5674 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion no 0.47
    11 GFF4361 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) no 0.47
    12 GFF538 FIG00454528: hypothetical protein no 0.46
    13 GFF6457 no description no 0.46
    14 GFF1044 hypothetical protein no 0.46
    15 GFF5654 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) no 0.46
    16 GFF68 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.23 0.45
    17 GFF6109 FIG00986406: hypothetical protein no 0.45
    18 GFF1303 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.44
    19 GFF4136 hypothetical protein no 0.44
    20 GFF3633 hypothetical protein no 0.43

    Or look for negative cofitness