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  • Top cofit genes for GFF6488 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4864 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.63
    2 GFF4720 Putrescine transport system permease protein potI no 0.56
    3 GFF2649 putative autotransporter protein no 0.55
    4 GFF3970 Ring hydroxylating dioxygenase, alpha subunit (EC 1.14.12.13) no 0.53
    5 GFF3906 Acyl-CoA dehydrogenase no 0.53
    6 GFF4817 Hydroxymethylpyrimidine ABC transporter, ATPase component no 0.52
    7 GFF4649 Iron-chelator utilization protein no 0.52
    8 GFF3912 Ferrous iron transport permease EfeU no 0.51
    9 GFF250 Homoserine/homoserine lactone efflux protein no 0.50
    10 GFF4353 Alpha-methylacyl-CoA racemase (EC 5.1.99.4) no 0.48
    11 GFF3576 no description no 0.48
    12 GFF4947 Erythritol kinase EryA (EC 2.7.1.27) no 0.48
    13 GFF4377 putative plasmid stabilization protein no 0.46
    14 GFF2208 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily no 0.46
    15 GFF4081 Multicopper oxidase no 0.46
    16 GFF6792 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) no 0.46
    17 GFF4690 Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA no 0.46
    18 GFF492 no description no 0.45
    19 GFF5488 Protein of unknown function Smg no 0.45
    20 GFF264 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.45

    Or look for negative cofitness