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  • Top cofit genes for GFF6487 from Variovorax sp. SCN45

    Gfa-like protein
    SEED: Gfa-like protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5191 Galactose-binding protein regulator no 0.48
    2 GFF3821 RND efflux system, inner membrane transporter no 0.48
    3 GFF1115 Putative transmembrane protein no 0.47
    4 GFF4776 Broad-specificity amino acid ABC transporter, substrate-binding protein no 0.47
    5 GFF3044 LPS-assembly protein LptD @ Organic solvent tolerance protein precursor no 0.46
    6 GFF119 FIG00348677: hypothetical protein no 0.46
    7 GFF4708 Transcriptional regulator RSp1267, LysR family no 0.45
    8 GFF6153 Transcriptional activator of acetoin/glycerol metabolism no 0.45
    9 GFF942 Iron-sulfur cluster-binding protein no 0.45
    10 GFF5048 no description no 0.44
    11 GFF1055 Fumarylacetoacetate hydrolase family protein no 0.43
    12 GFF5718 Flagellar hook protein FlgE no 0.43
    13 GFF4309 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.42
    14 GFF1970 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.42
    15 GFF1171 Transcriptional regulator, AraC family no 0.42
    16 GFF1341 ABC transporter, ATP-binding protein 2 RSc1754 no 0.42
    17 GFF5681 Predicted gluconate TRAP family transporter, DctM subunit no 0.41
    18 GFF3409 Probable lipoprotein signal peptide no 0.41
    19 GFF4819 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.41
    20 GFF7053 Transcriptional regulator, LysR family no 0.41

    Or look for negative cofitness