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    • Top cofit genes for GFF6482 from Variovorax sp. SCN45

    Transcriptional regulator, AcrR family
    SEED: transcriptional regulator, TetR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1556 Tricarboxylate transport protein TctC no 0.66
    2 GFF1370 Transcriptional regulator associated with Tricarboxylic transport no 0.60
    3 GFF2585 no description no 0.59
    4 GFF6043 tRNA/rRNA cytosine-C5-methylase no 0.53
    5 GFF5500 hypothetical protein no 0.52
    6 GFF426 Cobyric acid synthase (EC 6.3.5.10) no 0.52
    7 GFF1394 no description no 0.52
    8 GFF2500 Mutator MutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) no 0.51
    9 GFF799 Rrf2 family transcriptional regulator, group III no 0.50
    10 GFF2342 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.50
    11 GFF365 Acyl-CoA dehydrogenase no 0.49
    12 GFF1814 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase (EC 4.1.1.97) / Allantoate amidohydrolase (EC 3.5.3.9) no 0.49
    13 GFF1052 hypothetical protein no 0.48
    14 GFF1913 Short-chain dehydrogenase no 0.48
    15 GFF5007 probable membrane protein STY4873 no 0.47
    16 GFF7271 Transcriptional regulator, LacI family no 0.47
    17 GFF5091 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) no 0.47
    18 GFF3940 putative membrane protein no 0.47
    19 GFF2823 Hemin transport protein HmuS no 0.47
    20 GFF4970 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.47

    Or look for negative cofitness