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  • Top cofit genes for GFF6471 from Variovorax sp. SCN45

    Transcriptional regulator, AraC family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7411 no description no 0.61
    2 GFF7319 hypothetical protein no 0.59
    3 GFF3391 Chlorogenate esterase no 0.59
    4 GFF4733 Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family) no 0.59
    5 GFF6043 tRNA/rRNA cytosine-C5-methylase no 0.57
    6 GFF1263 Serine acetyltransferase (EC 2.3.1.30) no 0.57
    7 GFF211 protein of unknown function UPF0125 no 0.55
    8 GFF6547 Glutathione S-transferase (EC 2.5.1.18) no 0.54
    9 GFF2471 Outer membrane porin protein 32 precursor no 0.54
    10 GFF3114 Methionine ABC transporter ATP-binding protein no 0.53
    11 GFF2605 Tricarboxylate transport sensor protein TctE no 0.52
    12 GFF1051 no description no 0.52
    13 GFF7339 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.52
    14 GFF5669 hypothetical protein no 0.51
    15 GFF4319 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.50
    16 GFF5484 Protein translocase subunit YajC no 0.50
    17 GFF3521 DNA-binding response regulator KdpE 0.41 0.50
    18 GFF1198 no description no 0.50
    19 GFF1617 Phosphonate uptake and metabolism regulator, LysR-family no 0.50
    20 GFF1863 Uncharacterized MFS-type transporter no 0.49

    Or look for negative cofitness