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  • Top cofit genes for GFF6463 from Variovorax sp. SCN45

    Oxidoreductase, short-chain dehydrogenase/reductase family
    SEED: 3-hydroxybutyrate dehydrogenase (EC 1.1.1.30)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) no 0.67
    2 GFF3508 Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system no 0.66
    3 GFF2164 Transcriptional regulator, IclR family 0.35 0.66
    4 GFF7256 Dehydratase, IlvD/Edd family no 0.63
    5 GFF7390 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.62
    6 GFF1204 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) no 0.61
    7 GFF1063 dioxygenase, TauD/TfdA family no 0.60
    8 GFF3975 Metal-dependent hydrolase no 0.60
    9 GFF4064 no description no 0.60
    10 GFF5220 putative secreted oxidoreductase no 0.60
    11 GFF4996 no description no 0.59
    12 GFF7321 Sensor histidine kinase GlrK no 0.59
    13 GFF4697 TldE protein, part of TldE/TldD proteolytic complex no 0.58
    14 GFF2498 Glutamate N-acetyltransferase (EC 2.3.1.35) @ N-acetylglutamate synthase (EC 2.3.1.1) no 0.58
    15 GFF4821 Transcriptional regulator, AcrR family no 0.57
    16 GFF1680 KEGG: GntR family transcriptional regulator no 0.57
    17 GFF2108 hypothetical protein no 0.56
    18 GFF2400 no description no 0.56
    19 GFF1203 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) no 0.55
    20 GFF1173 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) 0.28 0.55

    Or look for negative cofitness