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  • Top cofit genes for GFF6452 from Variovorax sp. SCN45

    Putative diheme cytochrome c-553
    SEED: Putative diheme cytochrome c-553

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF875 no description no 0.57
    2 GFF3709 ABC transporter, substrate-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) no 0.54
    3 GFF2296 Putative transmembrane protein no 0.53
    4 GFF4034 Cobalt/zinc/cadmium resistance protein CzcD no 0.53
    5 GFF4373 FIG131328: Predicted ATP-dependent endonuclease of the OLD family no 0.53
    6 GFF765 hypothetical protein no 0.53
    7 GFF3523 hypothetical protein no 0.53
    8 GFF755 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB no 0.53
    9 GFF1596 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) no 0.53
    10 GFF6478 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.48 0.52
    11 GFF7272 D-glucarate permease no 0.52
    12 GFF4931 peptidase, family M14 no 0.52
    13 GFF1551 hypothetical protein no 0.52
    14 GFF4067 FIG00897050: hypothetical protein no 0.52
    15 GFF6123 ABC-type antimicrobial peptide transport system, ATPase component 0.35 0.51
    16 GFF2207 Flp pilus assembly protein TadB no 0.51
    17 GFF4502 Putative transmembrane protein no 0.51
    18 GFF4310 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.50
    19 GFF2303 Uncharacterized DUF2909 protein BB4826 no 0.50
    20 GFF5145 hypothetical protein no 0.50

    Or look for negative cofitness