Top cofit genes for GFF644 from Hydrogenophaga sp. GW460-11-11-14-LB1

type IV pili signal transduction protein PilI
KEGG: twitching motility protein PilI

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF737		Autolysin sensor kinase (EC 2.7.3.-)	0.79	0.70
2	GFF645		twitching motility protein PilJ	0.79	0.70
3	GFF1430		Flagellar biosynthesis protein FlhF	no	0.67
4	GFF3834		Probable transmembrane protein	no	0.66
5	GFF4921		3'-to-5' exoribonuclease RNase R	no	0.65
6	GFF738		Autolysis response regulater LytR	0.80	0.64
7	GFF5721		ATP-dependent RNA helicase NGO0650	no	0.63
8	GFF5140		DNA-3-methyladenine glycosylase II (EC 3.2.2.21)	no	0.63
9	GFF5156		Type IV fimbrial biogenesis protein PilW	no	0.62
10	GFF2572		Uncharacterized protein with LysM domain, COG1652	0.79	0.62
11	GFF340		Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	no	0.62
12	GFF3530		ATP-dependent RNA helicase RhlE	no	0.61
13	GFF1339		Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly	no	0.60
14	GFF4865		Type IV pilus biogenesis protein PilF	0.82	0.59
15	GFF3879		5-nucleotidase SurE (EC 3.1.3.5)	0.52	0.59
16	GFF3438		Poly(A) polymerase (EC 2.7.7.19)	no	0.58
17	GFF642		twitching motility protein PilG	0.74	0.58
18	GFF1279		Type IV fimbrial assembly, ATPase PilB	0.80	0.57
19	GFF5158		Type IV fimbrial biogenesis protein PilY1	no	0.56
20	GFF3572		protein of unknown function DUF1332	no	0.56

Or look for negative cofitness