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  • Top cofit genes for GFF6434 from Variovorax sp. SCN45

    Inner membrane protein YqiK
    SEED: Inner membrane protein YqiK

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5053 Uncharacterized protein SPO0681 no 0.57
    2 GFF675 KEGG: 2'-5' RNA ligase no 0.56
    3 GFF1603 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) no 0.54
    4 GFF5470 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.53
    5 GFF4528 Permease of the drug/metabolite transporter (DMT) superfamily no 0.53
    6 GFF1630 Esterase/lipase no 0.53
    7 GFF2559 hypothetical protein no 0.53
    8 GFF4925 ATPase component BioM of energizing module of biotin ECF transporter no 0.52
    9 GFF7174 no description no 0.51
    10 GFF504 SAM-dependent methyltransferases no 0.51
    11 GFF4703 Xylitol dehydrogenase (EC 1.1.1.9) no 0.50
    12 GFF6579 Conjugative transfer protein TrbB no 0.49
    13 GFF4347 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) no 0.48
    14 GFF2487 Two-component system sensor histidine kinase/response regulator hybrid no 0.48
    15 GFF6385 Mll4878 protein no 0.48
    16 GFF5376 hypothetical protein no 0.48
    17 GFF6455 Bll3817 protein no 0.47
    18 GFF1614 Phosphonate ABC transporter ATP-binding protein PhnC (TC 3.A.1.9.1) no 0.47
    19 GFF2646 Acetyl-CoA acetyltransferase no 0.47
    20 GFF2050 hypothetical protein no 0.46

    Or look for negative cofitness