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  • Top cofit genes for GFF6433 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3810 Conserved membrane protein in copper uptake, YcnI / Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II no 0.58
    2 GFF5412 no description no 0.52
    3 GFF33 Type IV pilus biogenesis protein PilZ 0.16 0.51
    4 GFF5238 General secretion pathway protein L no 0.50
    5 GFF5605 D-xylose ABC transporter, ATP-binding protein XylG no 0.50
    6 GFF469 hypothetical protein no 0.50
    7 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) no 0.49
    8 GFF744 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases no 0.49
    9 GFF3826 Response regulator receiver:LytTr DNA-binding region no 0.49
    10 GFF3809 Outer membrane receptor proteins, mostly Fe transport no 0.49
    11 GFF3133 hypothetical protein no 0.48
    12 GFF4298 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase no 0.48
    13 GFF5320 Type IV pilus biogenesis protein PilN no 0.48
    14 GFF5490 Uncharacterized protein with LysM domain, COG1652 no 0.48
    15 GFF5323 Type IV pilus biogenesis protein PilQ 0.14 0.48
    16 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) no 0.48
    17 GFF5896 Anthranilate synthase, aminase component (EC 4.1.3.27) no 0.48
    18 GFF5322 Type IV pilus biogenesis protein PilP no 0.48
    19 GFF2379 Serine/threonine protein kinase no 0.48
    20 GFF5310 Cytochrome c4 no 0.48

    Or look for negative cofitness