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  • Top cofit genes for GFF6430 from Variovorax sp. SCN45

    L-carnitine dehydratase/bile acid-inducible protein F
    SEED: L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1216 Isoaspartyl aminopeptidase (EC 3.4.19.5) @ Asp-X dipeptidase no 0.62
    2 GFF4999 hypothetical protein no 0.56
    3 GFF2208 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily no 0.55
    4 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) no 0.54
    5 GFF4024 Transcriptional regulator, MerR family no 0.53
    6 GFF5614 hypothetical protein no 0.53
    7 GFF2330 FOG: TPR repeat no 0.51
    8 GFF6086 Putative short-chain dehydrogenase no 0.50
    9 GFF6755 hypothetical protein no 0.50
    10 GFF654 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.50
    11 GFF7165 Adenylate cyclase (EC 4.6.1.1) no 0.50
    12 GFF4068 Heavy metal sensor histidine kinase no 0.49
    13 GFF3396 Benzoate ABC transporter, permease protein 1 no 0.48
    14 GFF422 no description no 0.48
    15 GFF5793 Low-affinity inorganic phosphate transporter no 0.48
    16 GFF1868 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.48
    17 GFF5796 no description no 0.47
    18 GFF1295 FIG00455815: hypothetical protein no 0.47
    19 GFF879 BUG/TctC family periplasmic protein no 0.47
    20 GFF3982 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) no 0.47

    Or look for negative cofitness