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  • Top cofit genes for GFF643 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4322 Acyl-CoA dehydrogenase no 0.57
    2 GFF3573 Efflux ABC transporter, ATP-binding protein no 0.54
    3 GFF3180 FIG00348182: hypothetical protein no 0.53
    4 GFF2481 Urease accessory protein UreF no 0.51
    5 GFF7127 Mobile element protein no 0.50
    6 GFF2422 Polysaccharide deacetylase no 0.50
    7 GFF6006 BUG/TctC family periplasmic protein no 0.49
    8 GFF1364 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.49
    9 GFF2205 hypothetical protein no 0.48
    10 GFF4128 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.47
    11 GFF4997 hypothetical protein no 0.46
    12 GFF4414 Conjugative transfer protein TrbB no 0.46
    13 GFF2293 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) no 0.46
    14 GFF6485 hypothetical protein no 0.46
    15 GFF3342 FIG00347825: hypothetical protein no 0.45
    16 GFF3609 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.45
    17 GFF3151 no description no 0.45
    18 GFF5255 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.44
    19 GFF6858 no description no 0.44
    20 GFF3495 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.44

    Or look for negative cofitness