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  • Top cofit genes for GFF6422 from Variovorax sp. SCN45

    Threonine dehydratase, catabolic (EC 4.3.1.19) @ L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17)
    SEED: Threonine dehydratase (EC 4.3.1.19)
    KEGG: threonine dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6889 Alpha-aminoadipate aminotransferase (EC 2.6.1.39) @ Leucine transaminase (EC 2.6.1.6) @ Valine transaminase no 0.65
    2 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.62
    3 GFF5409 FIG00576366: hypothetical protein no 0.62
    4 GFF5957 Uncharacterized MFS-type transporter no 0.60
    5 GFF5064 Exonuclease SbcC no 0.59
    6 GFF5790 putative membrane protein no 0.58
    7 GFF809 Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.58
    8 GFF2977 hypothetical protein no 0.56
    9 GFF7374 FIG00984748: hypothetical protein no 0.55
    10 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) no 0.55
    11 GFF7322 hypothetical protein 0.22 0.55
    12 GFF530 no description no 0.53
    13 GFF6216 hypothetical protein no 0.53
    14 GFF6905 Chloride channel protein no 0.53
    15 GFF6537 hypothetical protein no 0.52
    16 GFF3852 Tetrapyrrole methylase family protein no 0.52
    17 GFF4857 benzoate MFS transporter BenK no 0.52
    18 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) no 0.52
    19 GFF3650 FIG00932140: hypothetical protein no 0.51
    20 GFF183 Virulence protein no 0.51

    Or look for negative cofitness