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  • Top cofit genes for GFF6417 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7358 Phenylacetate ABC transporter, permease protein 2 no 0.62
    2 GFF3793 no description no 0.58
    3 GFF5496 BUG/TctC family periplasmic protein no 0.57
    4 GFF4426 Homolog of eukaryotic DNA ligase III no 0.56
    5 GFF6073 Tripartite tricarboxylate transporter TctA family no 0.55
    6 GFF6269 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases no 0.54
    7 GFF264 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.53
    8 GFF1093 Phosphate ABC transporter, permease protein PstC (TC 3.A.1.7.1) no 0.52
    9 GFF4393 Uncharacterized ABC1 family protein XCC_1720 no 0.52
    10 GFF5969 Transcriptional regulator, GntR family no 0.52
    11 GFF4377 putative plasmid stabilization protein no 0.52
    12 GFF312 FIG021862: membrane protein, exporter no 0.51
    13 GFF4690 Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA no 0.51
    14 GFF6230 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain no 0.51
    15 GFF1303 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.50
    16 GFF994 Cytoskeleton protein RodZ no 0.50
    17 GFF6856 DipZ protein no 0.49
    18 GFF517 no description no 0.49
    19 GFF322 GTP cyclohydrolase II homolog no 0.49
    20 GFF1753 LysR family transcriptional regulator lrhA no 0.49

    Or look for negative cofitness