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  • Top cofit genes for GFF6416 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2367 Transcriptional regulator, LysR family no 0.59
    2 GFF1683 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) no 0.56
    3 GFF5388 Two-component response regulatory protein BP2547 no 0.52
    4 GFF1881 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, gamma subunit (EC 1.2.7.-) / 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, alpha subunit (EC 1.2.7.-) no 0.51
    5 GFF2763 33 kDa chaperonin HslO no 0.51
    6 GFF3375 DNA-binding transcriptional regulator, MocR family / aminotransferase domain no 0.51
    7 GFF6823 BUG/TctC family periplasmic protein no 0.50
    8 GFF3022 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.49
    9 GFF2218 FIG00455441: hypothetical protein no 0.49
    10 GFF2484 Urease beta subunit (EC 3.5.1.5) no 0.49
    11 GFF782 Alpha-ketoglutarate-dependent dioxygenase AlkB (EC 1.14.11.33) no 0.49
    12 GFF4846 Conjugative transfer protein TrbE no 0.48
    13 GFF3525 Protein tyrosine/serine phosphatase no 0.48
    14 GFF5119 Ammonium transporter no 0.48
    15 GFF972 no description no 0.47
    16 GFF4065 Uncharacterized cysteine-rich DUF326 protein bsYhjQ/STM1261 no 0.47
    17 GFF3787 Biotin carboxylase (EC 6.3.4.14) no 0.47
    18 GFF5720 Flagellar basal-body rod protein FlgG no 0.47
    19 GFF2253 no description no 0.47
    20 GFF2802 DUF1176 domain-containing protein no 0.46

    Or look for negative cofitness