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  • Top cofit genes for GFF6407 from Variovorax sp. SCN45

    Phytanoyl-CoA dioxygenase
    SEED: Phytanoyl-CoA dioxygenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6372 T6SS component TssB (ImpB/VipA) no 0.60
    2 GFF2683 Protein containing domains DUF404, DUF407 no 0.52
    3 GFF4859 MBL-fold metallo-hydrolase superfamily no 0.52
    4 GFF2406 DipZ protein no 0.52
    5 GFF3032 Two-component transcriptional response regulator, LuxR family no 0.52
    6 GFF3348 Putative lipase no 0.51
    7 GFF7262 no description no 0.50
    8 GFF5529 Putative outer membrane protein no 0.50
    9 GFF315 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase no 0.49
    10 GFF4986 3-hydroxybenzoate 6-monooxygenase (EC 1.14.13.24) 0.18 0.49
    11 GFF6125 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) no 0.48
    12 GFF1789 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.48
    13 GFF5583 Transcriptional regulator PA0181, LysR family no 0.48
    14 GFF5770 Flagellar biosynthesis protein FlhB no 0.48
    15 GFF1264 Transcriptional regulator, Xre family no 0.48
    16 GFF7138 ATP-dependent 23S rRNA helicase DbpA no 0.47
    17 GFF3703 LemA family protein no 0.47
    18 GFF4883 Translation-disabling ACNase RloC no 0.47
    19 GFF786 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system no 0.47
    20 GFF3344 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains no 0.47

    Or look for negative cofitness