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  • Top cofit genes for GFF6403 from Variovorax sp. SCN45

    Stresses-induced protein Ves (HutD)
    SEED: Conserved hypothetical protein (perhaps related to histidine degradation)
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5976 Transcriptional regulator, AraC family no 0.52
    2 GFF6566 hypothetical protein no 0.50
    3 GFF6545 Uncharacterized MFS-type transporter no 0.50
    4 GFF5983 Transcriptional regulator, LysR family no 0.49
    5 GFF3556 BUG/TctC family periplasmic protein no 0.49
    6 GFF5510 protein of unknown function DUF306, Meta and HslJ no 0.49
    7 GFF4772 D-mannose isomerase (EC 5.3.1.7) no 0.48
    8 GFF6153 Transcriptional activator of acetoin/glycerol metabolism no 0.48
    9 GFF6094 1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149) no 0.46
    10 GFF4491 no description no 0.46
    11 GFF3140 no description no 0.46
    12 GFF864 no description no 0.45
    13 GFF6684 ABC transporter, ATP-binding protein no 0.45
    14 GFF4122 hypothetical protein no 0.45
    15 GFF3027 T6SS component TssK (ImpJ/VasE) no 0.44
    16 GFF4519 no description no 0.44
    17 GFF6174 Fluoride ion transporter CrcB no 0.44
    18 GFF5989 RND efflux system, membrane fusion protein no 0.43
    19 GFF454 Z-ring-associated protein ZapA no 0.43
    20 GFF1280 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.43

    Or look for negative cofitness