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  • Top cofit genes for GFF6399 from Variovorax sp. SCN45

    5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), N-terminal domain
    SEED: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
    KEGG: 5-methyltetrahydrofolate--homocysteine methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5958 FIG00537018: hypothetical protein no 0.71
    2 GFF3419 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.65
    3 GFF2032 Excinuclease ABC subunit A, dimeric form no 0.64
    4 GFF6494 protein of unknown function DUF1232 no 0.64
    5 GFF5590 no description no 0.64
    6 GFF3090 Colicin V production protein no 0.62
    7 GFF2283 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.61
    8 GFF4588 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) no 0.59
    9 GFF3255 16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193) no 0.59
    10 GFF1780 hypothetical protein no 0.59
    11 GFF2537 Glycerol-3-phosphate ABC transporter, substrate-binding protein UgpB no 0.58
    12 GFF4888 Mlr6156 protein no 0.58
    13 GFF265 RND efflux system, membrane fusion protein no 0.56
    14 GFF7035 UspA no 0.55
    15 GFF2815 Primosomal replication protein N no 0.55
    16 GFF5348 Histidinol-phosphate aminotransferase (EC 2.6.1.9) no 0.55
    17 GFF3082 hypothetical protein no 0.55
    18 GFF2618 no description no 0.55
    19 GFF2220 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.54
    20 GFF1962 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) 0.35 0.54

    Or look for negative cofitness