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  • Top cofit genes for GFF6384 from Variovorax sp. SCN45

    Peptide synthase
    SEED: Mll4877 protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF488 ATP-dependent Clp protease ATP-binding subunit ClpX no 0.64
    2 GFF6664 Putative transmembrane protein no 0.63
    3 GFF6128 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) no 0.63
    4 GFF4006 DNA polymerase I (EC 2.7.7.7) no 0.62
    5 GFF868 Uracil-DNA glycosylase, family 1 no 0.60
    6 GFF7377 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) no 0.59
    7 GFF84 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.59
    8 GFF6528 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) no 0.58
    9 GFF295 Ribonuclease G no 0.58
    10 GFF4639 Glucose-1-phosphate cytidylyltransferase (EC 2.7.7.33) no 0.58
    11 GFF6868 SAM-dependent methyltransferase no 0.58
    12 GFF2845 5'-nucleotidase SurE (EC 3.1.3.5) no 0.58
    13 GFF6634 DNA mismatch repair protein MutS no 0.58
    14 GFF5482 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.32 0.58
    15 GFF4492 Protein of unknown function DUF484 no 0.58
    16 GFF399 3'-to-5' exoribonuclease RNase R no 0.58
    17 GFF1003 HflC protein 0.28 0.58
    18 GFF4944 Excinuclease ABC subunit A no 0.57
    19 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I no 0.57
    20 GFF1899 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits no 0.57

    Or look for negative cofitness