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  • Top cofit genes for GFF6372 from Variovorax sp. SCN45

    T6SS component TssB (ImpB/VipA)
    SEED: Uncharacterized protein ImpB
    KEGG: type VI secretion system protein ImpB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4986 3-hydroxybenzoate 6-monooxygenase (EC 1.14.13.24) no 0.60
    2 GFF6407 Phytanoyl-CoA dioxygenase no 0.60
    3 GFF7025 hypothetical protein no 0.55
    4 GFF4420 Conjugative transfer protein TrbL no 0.54
    5 GFF2560 FIG00932643: hypothetical protein no 0.52
    6 GFF4534 Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like no 0.52
    7 GFF4987 3-fumarylpyruvate hydrolase (EC 3.7.1.20) no 0.51
    8 GFF5532 Putative oxidoreductase no 0.49
    9 GFF7138 ATP-dependent 23S rRNA helicase DbpA no 0.48
    10 GFF5993 putative membrane protein no 0.48
    11 GFF64 hypothetical protein no 0.47
    12 GFF6809 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.47
    13 GFF1650 NmrA-like no 0.47
    14 GFF2953 Transcriptional regulator, AraC family no 0.47
    15 GFF761 FIG00537905: hypothetical protein no 0.47
    16 GFF6474 hypothetical protein no 0.46
    17 GFF3703 LemA family protein no 0.46
    18 GFF2492 BUG/TctC family periplasmic protein no 0.46
    19 GFF6057 ABC-type Fe3+ transport system, periplasmic component no 0.46
    20 GFF6831 hypothetical protein no 0.46

    Or look for negative cofitness