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  • Top cofit genes for GFF6370 from Variovorax sp. SCN45

    T6SS component Hcp
    SEED: Uncharacterized protein ImpD
    KEGG: type VI secretion system secreted protein Hcp

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4265 hypothetical protein no 0.57
    2 GFF6837 BUG/TctC family periplasmic protein no 0.54
    3 GFF4092 Copper tolerance protein no 0.53
    4 GFF543 Uncharacterized deacetylase PA5390 no 0.53
    5 GFF7167 Pirin no 0.53
    6 GFF4048 Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC no 0.53
    7 GFF707 probable integral membrane protein NMA1898 no 0.52
    8 GFF1085 no description no 0.50
    9 GFF2405 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.49
    10 GFF7091 no description no 0.48
    11 GFF711 KEGG: ribose transport system permease protein no 0.48
    12 GFF4579 putative oxidoreductase, nitronate monooxygenase family no 0.48
    13 GFF5278 Transaldolase (EC 2.2.1.2) no 0.47
    14 GFF1548 Tripartite tricarboxylate transporter TctA family no 0.47
    15 GFF6606 no description no 0.47
    16 GFF3781 Transcriptional regulator, AcrR family no 0.46
    17 GFF1603 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) no 0.46
    18 GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO no 0.45
    19 GFF4672 Exoenzymes regulatory protein AepA precursor no 0.45
    20 GFF1678 Transcriptional regulator, GntR family no 0.45

    Or look for negative cofitness