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  • Top cofit genes for GFF6368 from Variovorax sp. SCN45

    T6SS lysozyme-like component TssE
    SEED: Uncharacterized protein ImpF
    KEGG: type VI secretion system protein ImpF

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5669 hypothetical protein no 0.63
    2 GFF3391 Chlorogenate esterase no 0.62
    3 GFF1711 DUF3701 domain / Site-specific tyrosine recombinase no 0.57
    4 GFF4277 Small subunit naph/bph dioxygenase no 0.56
    5 GFF6066 Quinone oxidoreductase (EC 1.6.5.5) no 0.56
    6 GFF5372 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA no 0.56
    7 GFF7368 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.56
    8 GFF3356 Probable transmembrane protein no 0.56
    9 GFF3000 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) no 0.55
    10 GFF3360 no description no 0.55
    11 GFF2091 Cobalt/zinc/cadmium resistance protein CzcD no 0.55
    12 GFF5843 hypothetical protein no 0.54
    13 GFF3517 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) 0.52 0.54
    14 GFF5946 T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA no 0.54
    15 GFF3470 Permease of the drug/metabolite transporter (DMT) superfamily no 0.53
    16 GFF5127 no description no 0.53
    17 GFF2450 Dihydropyrimidinase (EC 3.5.2.2) @ D-hydantoinase (EC 3.5.2.2) no 0.53
    18 GFF317 Acyl carrier protein no 0.52
    19 GFF769 Conserved TM helix no 0.52
    20 GFF2901 FIG00347713: hypothetical protein no 0.52

    Or look for negative cofitness