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  • Top cofit genes for GFF6367 from Variovorax sp. SCN45

    T6SS component TssF (ImpG/VasA)
    SEED: Protein ImpG/VasA
    KEGG: type VI secretion system protein ImpG

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2215 L,D-transpeptidase no 0.48
    2 GFF1112 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.47
    3 GFF5793 Low-affinity inorganic phosphate transporter no 0.47
    4 GFF6637 Putative amidase amiC (EC 3.5.1.4) no 0.44
    5 GFF6391 RfbJ protein no 0.44
    6 GFF5233 General secretion pathway protein F / Type II secretory pathway, component PulF no 0.43
    7 GFF1943 DNA polymerase III alpha subunit (EC 2.7.7.7) no 0.42
    8 GFF1362 no description no 0.42
    9 GFF6978 no description no 0.41
    10 GFF1260 no description no 0.41
    11 GFF2040 Putative drug efflux protein 0.36 0.41
    12 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) no 0.40
    13 GFF6206 Transcriptional regulator, GntR family no 0.40
    14 GFF5206 Cyanophycin synthase (EC 6.3.2.29)(EC 6.3.2.30) no 0.40
    15 GFF5123 no description no 0.40
    16 GFF1459 Glutathione S-transferase (EC 2.5.1.18) no 0.40
    17 GFF710 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) no 0.40
    18 GFF1889 Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate no 0.40
    19 GFF1771 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.39
    20 GFF1608 Aminotransferase, class III no 0.39

    Or look for negative cofitness