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  • Top cofit genes for GFF6366 from Variovorax sp. SCN45

    T6SS component TssG (ImpH/VasB)
    SEED: Uncharacterized protein ImpH/VasB
    KEGG: type VI secretion system protein ImpH

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4925 ATPase component BioM of energizing module of biotin ECF transporter no 0.59
    2 GFF5533 hypothetical protein no 0.58
    3 GFF646 no description no 0.54
    4 GFF6939 ABC-type antimicrobial peptide transport system, permease component no 0.54
    5 GFF1745 Acyl-CoA dehydrogenase no 0.51
    6 GFF5107 Transcriptional regulator, LysR family no 0.51
    7 GFF1651 Transcriptional regulator, AcrR family no 0.50
    8 GFF2838 hypothetical protein no 0.49
    9 GFF5502 Transcriptional regulator, LysR family no 0.48
    10 GFF681 Hypothetical protein in cluster with At3g50560-like gene family no 0.47
    11 GFF1603 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) no 0.47
    12 GFF1786 hypothetical protein no 0.47
    13 GFF1197 Transcriptional regulator, LysR family no 0.47
    14 GFF2469 hypothetical protein no 0.47
    15 GFF5918 T6SS component TssC (ImpC/VipB) no 0.47
    16 GFF552 Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8) no 0.47
    17 GFF4048 Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC no 0.47
    18 GFF4858 Transposase no 0.46
    19 GFF6104 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) 0.13 0.46
    20 GFF1901 no description no 0.46

    Or look for negative cofitness