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  • Top cofit genes for PS417_03230 from Pseudomonas simiae WCS417

    TetR family transcriptional regulator
    SEED: Transcriptional regulator RutR of pyrimidine catabolism (TetR family)
    KEGG: TetR/AcrR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19615 chemotaxis protein CheW no 0.58
    2 PS417_18540 colicin V production CvpA 0.43 0.55
    3 PS417_19805 flagellar M-ring protein FliF 0.72 0.51
    4 PS417_21390 hypothetical protein 0.20 0.50
    5 PS417_19620 hypothetical protein no 0.49
    6 PS417_19645 chemotaxis protein no 0.49
    7 PS417_19800 flagellar motor switch protein FliG 0.75 0.49
    8 PS417_19675 chemotaxis protein CheY no 0.49
    9 PS417_19660 cobalamin biosynthesis protein CobQ no 0.49
    10 PS417_19665 flagellar motor protein MotD 0.57 0.48
    11 PS417_04285 protease TldD 0.60 0.48
    12 PS417_19710 flagellar biosynthesis protein FlhA 0.80 0.48
    13 PS417_19755 flagellar motor switch protein FliM no 0.48
    14 PS417_19630 LuxR family transcriptional regulator no 0.48
    15 PS417_19625 histidine kinase no 0.47
    16 PS417_19740 flagellar biosynthesis protein flip 0.71 0.47
    17 PS417_03165 hypothetical protein no 0.46
    18 PS417_19730 flagellar biosynthesis protein FliR no 0.46
    19 PS417_07095 histidine kinase 0.38 0.46
    20 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 no 0.46

    Or look for negative cofitness