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  • Top cofit genes for GFF6358 from Variovorax sp. SCN45

    T6SS protein serine/threonine phosphatase PppA
    SEED: Protein phosphatase 2C-like:Protein phosphatase 2C-like

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4389 Type IV secretory pathway, VirD2 components (relaxase) no 0.49
    2 GFF5634 no description no 0.47
    3 GFF3063 mandelate racemase/muconate lactonizing enzyme family protein no 0.46
    4 GFF2883 CaiB/BaiF family protein no 0.45
    5 GFF2763 33 kDa chaperonin HslO no 0.44
    6 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) no 0.43
    7 GFF6210 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.43
    8 GFF1218 O-antigen acetylase no 0.42
    9 GFF4876 FIG00973848: hypothetical protein no 0.41
    10 GFF3548 hypothetical protein no 0.40
    11 GFF7323 Transcriptional response regulatory protein GlrR 0.51 0.40
    12 GFF6930 no description no 0.40
    13 GFF4183 hypothetical protein no 0.40
    14 GFF2051 FIG00463476: hypothetical protein no 0.39
    15 GFF5112 Glutathione peroxidase (EC 1.11.1.9) @ Thioredoxin peroxidase (EC 1.11.1.15) no 0.39
    16 GFF7366 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.39
    17 GFF375 hypothetical protein no 0.38
    18 GFF2505 hypothetical protein no 0.38
    19 GFF1116 Membrane-bound lytic murein transglycosylase D 0.78 0.37
    20 GFF531 hypothetical protein no 0.37

    Or look for negative cofitness