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  • Top cofit genes for GFF6354 from Variovorax sp. SCN45

    T6SS component TssK (ImpJ/VasE)
    SEED: Uncharacterized protein ImpJ/VasE
    KEGG: type VI secretion system protein ImpJ

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5470 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.60
    2 GFF6653 Aminotransferase, class III no 0.58
    3 GFF2838 hypothetical protein no 0.56
    4 GFF1875 no description no 0.55
    5 GFF6242 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD no 0.52
    6 GFF1762 no description no 0.52
    7 GFF3394 Benzoate ABC transporter, ATP-binding protein 1 no 0.51
    8 GFF4541 Uncharacterized protein conserved in bacteria no 0.51
    9 GFF6569 no description no 0.50
    10 GFF1692 Two-component system sensor histidine kinase no 0.50
    11 GFF4770 Multidrug efflux system EmrAB-OMF, membrane fusion component EmrA no 0.49
    12 GFF2923 Tripartite tricarboxylate transporter TctC family no 0.48
    13 GFF6330 BUG/TctC family periplasmic protein no 0.48
    14 GFF627 Secretion protein HlyD no 0.48
    15 GFF506 hypothetical protein no 0.47
    16 GFF5053 Uncharacterized protein SPO0681 no 0.47
    17 GFF4109 Aspartate aminotransferase (EC 2.6.1.1) no 0.47
    18 GFF6268 BUG/TctC family periplasmic protein no 0.47
    19 GFF6997 Flagellar basal-body rod protein FlgC no 0.47
    20 GFF3219 hypothetical protein no 0.46

    Or look for negative cofitness