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Cofit
Protein
Homologs
Top cofit genes for GFF6352 from
Variovorax sp. SCN45
T6SS component TssM (IcmF/VasK)
SEED: IcmF-related protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4020
Arsenic resistance protein ArsH
no
0.58
2
GFF6691
hypothetical protein
no
0.55
3
GFF4582
TRAP-type C4-dicarboxylate transport system, small permease component
no
0.53
4
GFF335
Cytosine deaminase (EC 3.5.4.1)
no
0.53
5
GFF1020
hypothetical protein
no
0.52
6
GFF4955
hypothetical protein
no
0.51
7
GFF4644
no description
no
0.49
8
GFF2014
hypothetical protein
no
0.48
9
GFF4549
Cysteine synthase (EC 2.5.1.47)
no
0.47
10
GFF4029
Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)
no
0.47
11
GFF7302
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
no
0.46
12
GFF1089
Polyphosphate kinase (EC 2.7.4.1)
no
0.46
13
GFF1656
hypothetical protein
no
0.46
14
GFF6800
ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.46
15
GFF1021
Transcriptional regulator, Xre-family with cupin domain
no
0.45
16
GFF3135
no description
no
0.45
17
GFF4157
hypothetical protein
no
0.45
18
GFF1268
FIG022199: FAD-binding protein
no
0.45
19
GFF5682
TRAP-type transport system, periplasmic component
no
0.44
20
GFF5608
Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8)
0.28
0.44
Or look for
negative cofitness