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  • Top cofit genes for GFF6352 from Variovorax sp. SCN45

    T6SS component TssM (IcmF/VasK)
    SEED: IcmF-related protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4020 Arsenic resistance protein ArsH no 0.58
    2 GFF6691 hypothetical protein no 0.55
    3 GFF4582 TRAP-type C4-dicarboxylate transport system, small permease component no 0.53
    4 GFF335 Cytosine deaminase (EC 3.5.4.1) no 0.53
    5 GFF1020 hypothetical protein no 0.52
    6 GFF4955 hypothetical protein no 0.51
    7 GFF4644 no description no 0.49
    8 GFF2014 hypothetical protein no 0.48
    9 GFF4549 Cysteine synthase (EC 2.5.1.47) no 0.47
    10 GFF4029 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) no 0.47
    11 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) no 0.46
    12 GFF1089 Polyphosphate kinase (EC 2.7.4.1) no 0.46
    13 GFF1656 hypothetical protein no 0.46
    14 GFF6800 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.46
    15 GFF1021 Transcriptional regulator, Xre-family with cupin domain no 0.45
    16 GFF3135 no description no 0.45
    17 GFF4157 hypothetical protein no 0.45
    18 GFF1268 FIG022199: FAD-binding protein no 0.45
    19 GFF5682 TRAP-type transport system, periplasmic component no 0.44
    20 GFF5608 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8) 0.28 0.44

    Or look for negative cofitness