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  • Top cofit genes for GFF6331 from Variovorax sp. SCN45

    D-octopine dehydrogenase (EC 1.5.1.11)
    SEED: D-octopine dehydrogenase (EC 1.5.1.11)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5455 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) no 0.59
    2 GFF4396 Mobile element protein no 0.56
    3 GFF5693 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.56
    4 GFF5295 Ferrichrome-iron receptor no 0.53
    5 GFF7268 BUG/TctC family periplasmic protein no 0.53
    6 GFF5496 BUG/TctC family periplasmic protein 0.28 0.52
    7 GFF1234 Peptide-methionine (S)-S-oxide reductase MsrA (EC 1.8.4.11) no 0.51
    8 GFF2289 Glutathione-regulated potassium-efflux system ancillary protein KefF no 0.51
    9 GFF5902 probable membrane protein STY1534 no 0.50
    10 GFF4846 Conjugative transfer protein TrbE no 0.50
    11 GFF1007 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) no 0.49
    12 GFF3314 FIG00349255: hypothetical protein no 0.48
    13 GFF890 Two-component system sensor histidine kinase no 0.48
    14 GFF1116 Membrane-bound lytic murein transglycosylase D no 0.48
    15 GFF5308 Epoxide hydrolase (EC 3.3.2.9) no 0.48
    16 GFF2457 no description no 0.48
    17 GFF7005 Flagellar biosynthesis protein FlhB no 0.48
    18 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) no 0.47
    19 GFF1847 Nucleoside ABC transporter, substrate-binding protein no 0.47
    20 GFF6562 T1SS secreted agglutinin RTX no 0.47

    Or look for negative cofitness