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  • Top cofit genes for GFF6319 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6562 T1SS secreted agglutinin RTX no 0.62
    2 GFF3707 ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown) no 0.60
    3 GFF2649 putative autotransporter protein no 0.59
    4 GFF7367 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.58
    5 GFF6585 D-glycerate 2-kinase (EC 2.7.1.165) no 0.58
    6 GFF3792 no description no 0.56
    7 GFF2682 Protein containing domains DUF403 no 0.56
    8 GFF7243 HtrA protease/chaperone protein no 0.55
    9 GFF1833 (S)-mandelate dehydrogenase (EC 1.1.99.31) no 0.55
    10 GFF6792 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) no 0.53
    11 GFF56 hypothetical protein no 0.53
    12 GFF6219 hypothetical protein no 0.52
    13 GFF3527 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase no 0.52
    14 GFF1363 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.52
    15 GFF5295 Ferrichrome-iron receptor no 0.52
    16 GFF3371 FIG00456413: hypothetical protein no 0.51
    17 GFF95 hypothetical protein no 0.51
    18 GFF5544 FIG001614: Membrane protein no 0.51
    19 GFF2042 Efflux ABC transporter, ATP-binding protein no 0.50
    20 GFF7314 no description no 0.50

    Or look for negative cofitness