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  • Top cofit genes for GFF6309 from Variovorax sp. SCN45

    Secreted and surface protein containing fasciclin-like repeats
    SEED: Secreted and surface protein containing fasciclin-like repeats

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2787 Transcriptional regulator PA1859, LysR family no 0.57
    2 GFF201 Probable ferredoxin oxidoreductase oxidoreductase protein (EC 1.-.-.- ) no 0.57
    3 GFF5430 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB no 0.57
    4 GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) no 0.54
    5 GFF2222 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.53
    6 GFF467 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.53
    7 GFF2173 no description no 0.52
    8 GFF3060 Dihydrodipicolinate synthase family no 0.52
    9 GFF1839 Integral membrane protein no 0.51
    10 GFF2737 Uncharacterized MFS-type transporter no 0.51
    11 GFF4877 no description no 0.50
    12 GFF3304 Monofunctional biosynthetic peptidoglycan transglycosylase no 0.50
    13 GFF1841 Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4) no 0.49
    14 GFF2100 no description no 0.49
    15 GFF5192 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) no 0.48
    16 GFF3219 hypothetical protein no 0.48
    17 GFF6621 Mobile element protein no 0.48
    18 GFF4179 hypothetical protein no 0.47
    19 GFF2193 PE_PGRS no 0.47
    20 GFF5273 Various polyols ABC transporter, permease protein 1 no 0.47

    Or look for negative cofitness