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  • Top cofit genes for GFF6304 from Variovorax sp. SCN45

    Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)
    SEED: Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)
    KEGG: histidinol-phosphate aminotransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6515 no description 0.19 0.69
    2 GFF4896 Integrase no 0.57
    3 GFF1462 L-carnitine dehydratase/bile acid-inducible protein F no 0.55
    4 GFF3386 hypothetical protein no 0.54
    5 GFF7322 hypothetical protein no 0.53
    6 GFF4935 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.53
    7 GFF6964 Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) 0.75 0.52
    8 GFF6973 Mobile element protein no 0.52
    9 GFF5160 Outer membrane protein W precursor no 0.52
    10 GFF1331 Transcriptional regulator, AraC family no 0.52
    11 GFF2083 putative periplasmic membrane protein 0.28 0.51
    12 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) no 0.51
    13 GFF1753 LysR family transcriptional regulator lrhA no 0.51
    14 GFF1449 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) no 0.50
    15 GFF4124 no description no 0.50
    16 GFF4422 Conjugative transfer protein TrbG no 0.50
    17 GFF2075 BUG/TctC family periplasmic protein no 0.50
    18 GFF6315 Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90) no 0.49
    19 GFF4767 Efflux ABC transporter, permease/ATP-binding protein no 0.49
    20 GFF3765 no description 0.66 0.49

    Or look for negative cofitness