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  • Top cofit genes for GFF6300 from Variovorax sp. SCN45

    CaiB/BaiF family protein
    SEED: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1683 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) no 0.65
    2 GFF6928 Putative transmembrane protein 0.21 0.60
    3 GFF3518 no description no 0.60
    4 GFF501 hypothetical protein no 0.58
    5 GFF3592 hypothetical protein no 0.54
    6 GFF4164 Thymidine phosphorylase (EC 2.4.2.4) no 0.53
    7 GFF4189 NUDIX hydrolase no 0.51
    8 GFF2275 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) no 0.50
    9 GFF5819 no description no 0.50
    10 GFF4958 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.50
    11 GFF4171 hypothetical protein no 0.50
    12 GFF6744 hypothetical protein no 0.50
    13 GFF1427 Mandelate racemase (EC 5.1.2.2) no 0.50
    14 GFF2554 Integral membrane protein no 0.49
    15 GFF4221 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) no 0.49
    16 GFF6949 no description no 0.48
    17 GFF5281 Xylulose kinase (EC 2.7.1.17) no 0.47
    18 GFF3525 Protein tyrosine/serine phosphatase no 0.47
    19 GFF5957 Uncharacterized MFS-type transporter no 0.46
    20 GFF2087 Ser/Thr and Tyr protein phosphatase (dual specificity) no 0.46

    Or look for negative cofitness