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  • Top cofit genes for GFF6298 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4778 Broad-specificity amino acid ABC transporter, permease protein 1 0.31 0.59
    2 GFF1356 Putative manganese efflux pump MntP no 0.58
    3 GFF3451 no description no 0.56
    4 GFF1424 Phenylacetate ABC transporter, permease protein 2 no 0.56
    5 GFF2924 BUG/TctC family periplasmic protein no 0.56
    6 GFF4820 BUG/TctC family periplasmic protein no 0.51
    7 GFF2382 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.66) 0.32 0.49
    8 GFF1332 no description no 0.49
    9 GFF2385 no description no 0.48
    10 GFF2416 Transcriptional regulator YbhD, LysR family no 0.48
    11 GFF6887 Transporter, LysE family no 0.48
    12 GFF4708 Transcriptional regulator RSp1267, LysR family no 0.47
    13 GFF267 no description no 0.46
    14 GFF6385 Mll4878 protein no 0.46
    15 GFF3244 Spermidine synthase N-terminal extension / Spermidine synthase (EC 2.5.1.16) no 0.46
    16 GFF2777 Uncharacterized UPF0721 integral membrane protein no 0.46
    17 GFF1016 no description no 0.46
    18 GFF3797 Ammonia monooxygenase no 0.45
    19 GFF4632 Glycosyl transferase, family 2 no 0.45
    20 GFF4109 Aspartate aminotransferase (EC 2.6.1.1) no 0.45

    Or look for negative cofitness