Top cofit genes for GFF6290 from Variovorax sp. SCN45

RNA polymerase sigma-54 factor RpoN
SEED: RNA polymerase sigma-54 factor RpoN
KEGG: RNA polymerase sigma-54 factor

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF5414		hypothetical protein	no	0.97
2	GFF5321		Type IV pilus biogenesis protein PilO	0.64	0.97
3	GFF6075		Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB	no	0.97
4	GFF2519		FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)	0.53	0.97
5	GFF2508		Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-)	0.64	0.97
6	GFF5419		Type IV pilus biogenesis protein PilE	0.34	0.97
7	GFF5418		Type IV fimbrial biogenesis protein PilY1	no	0.97
8	GFF2510		Type IV fimbrial assembly, ATPase PilB	0.47	0.96
9	GFF5319		Type IV pilus biogenesis protein PilM	0.51	0.96
10	GFF993		Type IV pilus biogenesis protein PilF	0.50	0.96
11	GFF5417		hypothetical protein	no	0.96
12	GFF5416		Type IV fimbrial biogenesis protein PilW	no	0.96
13	GFF2509		Type IV fimbrial assembly protein PilC	0.48	0.96
14	GFF4432		Two-component system response regulator protein	0.65	0.96
15	GFF5320		Type IV pilus biogenesis protein PilN	0.53	0.96
16	GFF5490		Uncharacterized protein with LysM domain, COG1652	0.63	0.96
17	GFF5322		Type IV pilus biogenesis protein PilP	0.57	0.95
18	GFF33		Type IV pilus biogenesis protein PilZ	no	0.95
19	GFF3826		Response regulator receiver:LytTr DNA-binding region	no	0.95
20	GFF5415		Type IV fimbrial biogenesis protein PilV	no	0.95

Or look for negative cofitness