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  • Top cofit genes for GFF627 from Variovorax sp. SCN45

    Secretion protein HlyD
    SEED: Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3415 Cyclase no 0.69
    2 GFF3309 Beta-hexosaminidase (EC 3.2.1.52) no 0.68
    3 GFF374 Transcription elongation factor GreA no 0.67
    4 GFF1012 Cystathionine beta-lyase (EC 4.4.1.8) no 0.67
    5 GFF1288 Sulfate transport system permease protein CysT 0.60 0.67
    6 GFF836 Vitamin B12 ABC transporter, substrate-binding protein BtuF no 0.66
    7 GFF4063 Cytochrome c family protein no 0.66
    8 GFF2250 Putative stomatin/prohibitin-family membrane protease subunit aq_911 no 0.65
    9 GFF5984 L-lactate dehydrogenase no 0.65
    10 GFF3127 no description no 0.65
    11 GFF4634 Transketolase, C-terminal section (EC 2.2.1.1) no 0.65
    12 GFF7376 Transcriptional regulator, LysR family no 0.64
    13 GFF2844 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) no 0.64
    14 GFF3842 Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives) no 0.64
    15 GFF6030 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.64
    16 GFF6580 CopG domain-containing protein no 0.64
    17 GFF1002 HflK protein no 0.63
    18 GFF6653 Aminotransferase, class III no 0.63
    19 GFF426 Cobyric acid synthase (EC 6.3.5.10) no 0.63
    20 GFF2293 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) no 0.63

    Or look for negative cofitness