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  • Top cofit genes for GFF6266 from Variovorax sp. SCN45

    putative lipoprotein
    SEED: probable exported protein YPO4070

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2458 CzcABC family efflux RND transporter, membrane fusion protein no 0.53
    2 GFF48 DNA double-strand break repair protein Mre11 no 0.52
    3 GFF6081 Peptidase S1 and S6, chymotrypsin/Hap no 0.49
    4 GFF3028 T6SS outer membrane component TssL (ImpK/VasF) no 0.49
    5 GFF1650 NmrA-like no 0.48
    6 GFF779 hypothetical protein no 0.48
    7 GFF6819 hypothetical protein no 0.48
    8 GFF5874 hypothetical protein no 0.47
    9 GFF4619 Altronate dehydratase (EC 4.2.1.7) no 0.47
    10 GFF1433 hypothetical protein no 0.46
    11 GFF2520 UPF0053 inner membrane protein YtfL no 0.45
    12 GFF2259 Alcohol dehydrogenase (EC 1.1.1.1) no 0.45
    13 GFF3809 Outer membrane receptor proteins, mostly Fe transport no 0.45
    14 GFF4812 no description no 0.44
    15 GFF3384 Transcriptional regulator, Crp/Fnr family no 0.44
    16 GFF6026 no description no 0.44
    17 GFF4691 Cobalt/zinc/cadmium resistance protein CzcD no 0.44
    18 GFF6737 Uncharacterized aldehyde oxidase, 2Fe-2S subunit no 0.44
    19 GFF1128 Alkyl hydroperoxide reductase subunit C-like protein no 0.44
    20 GFF3902 Trans-aconitate 2-methyltransferase (EC 2.1.1.144) no 0.43

    Or look for negative cofitness