• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF6262 from Variovorax sp. SCN45

    Transcriptional regulator PhnF
    SEED: Transcriptional regulator PhnF
    KEGG: GntR family transcriptional regulator, phosphonate transport system regulatory protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1448 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.69
    2 GFF1421 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.68
    3 GFF4461 hypothetical protein no 0.66
    4 GFF6341 no description no 0.66
    5 GFF4181 hypothetical protein no 0.64
    6 GFF3166 Transcriptional regulator, IclR family no 0.64
    7 GFF5518 Nudix hydrolase family protein KPN_02621 no 0.63
    8 GFF5917 T6SS component TssB (ImpB/VipA) no 0.63
    9 GFF5959 Putative amidase R03093 no 0.63
    10 GFF7334 Nucleoside-diphosphate-sugar epimerases no 0.62
    11 GFF76 Alkanesulfonates transport system permease protein no 0.62
    12 GFF5636 Molybdenum ABC transporter, substrate-binding protein ModA no 0.61
    13 GFF3335 no description no 0.61
    14 GFF1550 no description no 0.61
    15 GFF4950 ABC transporter, permease protein (cluster 2, ribose/xylose/arabinose/galactose) no 0.60
    16 GFF1703 DNA for 3-methylaspartate ammonia-lyase, glutamate mutase no 0.58
    17 GFF4021 Uncharacterized MFS-type transporter no 0.57
    18 GFF2617 no description no 0.57
    19 GFF1500 Transcriptional regulator, IclR family no 0.57
    20 GFF5957 Uncharacterized MFS-type transporter no 0.56

    Or look for negative cofitness