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  • Top cofit genes for GFF6261 from Variovorax sp. SCN45

    Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG (EC 2.7.8.37)
    SEED: PhnG protein
    KEGG: PhnG protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6814 NADH dehydrogenase (EC 1.6.99.3) no 0.50
    2 GFF7326 Integrase 0.29 0.48
    3 GFF2951 Arsenate reductase (EC 1.20.4.1) glutaredoxin-coupled, glutaredoxin-like family no 0.47
    4 GFF6774 ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) no 0.46
    5 GFF2793 Tricarboxylate transport protein TctC no 0.46
    6 GFF7357 Phenylacetate ABC transporter, ATP-binding protein 1 no 0.45
    7 GFF3502 hypothetical protein no 0.45
    8 GFF61 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.32 0.45
    9 GFF4602 2-hydroxychromene-2-carboxylate isomerase family protein no 0.44
    10 GFF2789 Peptidyl-tRNA hydrolase ArfB (EC 3.1.1.29) 0.27 0.44
    11 GFF2708 no description no 0.44
    12 GFF6996 Flagellar hook-basal body complex protein FliE no 0.44
    13 GFF7309 Transcriptional regulator, LysR family no 0.43
    14 GFF4005 hypothetical protein no 0.43
    15 GFF1561 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.43
    16 GFF7012 Taurine ABC transporter, ATP-binding protein TauB no 0.43
    17 GFF5681 Predicted gluconate TRAP family transporter, DctM subunit no 0.43
    18 GFF1775 no description no 0.43
    19 GFF447 Vitamin B12 ABC transporter, substrate-binding protein BtuF 0.38 0.42
    20 GFF4548 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.42

    Or look for negative cofitness