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  • Top cofit genes for GFF6259 from Variovorax sp. SCN45

    Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI (EC 2.7.8.37)
    SEED: PhnI protein
    KEGG: PhnI protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF754 FIG00975093: hypothetical protein no 0.59
    2 GFF2365 Altronate dehydratase (EC 4.2.1.7) no 0.56
    3 GFF3184 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.55
    4 GFF2131 Putative protease no 0.55
    5 GFF4778 Broad-specificity amino acid ABC transporter, permease protein 1 no 0.54
    6 GFF2635 hypothetical protein no 0.54
    7 GFF1583 Fumarate hydratase class I, beta region (EC 4.2.1.2); L(+)-tartrate dehydratase beta subunit (EC 4.2.1.32) no 0.53
    8 GFF3727 Transcriptional regulator, AcrR family 0.43 0.53
    9 GFF2618 no description no 0.53
    10 GFF4632 Glycosyl transferase, family 2 no 0.52
    11 GFF424 Cobalamin synthase (EC 2.7.8.26) no 0.51
    12 GFF4623 Transcriptional regulator, AcrR family no 0.51
    13 GFF1013 hypothetical protein no 0.51
    14 GFF5815 Uncharacterized MFS-type transporter no 0.51
    15 GFF4829 Isocitrate lyase (EC 4.1.3.1) no 0.51
    16 GFF7035 UspA no 0.50
    17 GFF4095 no description no 0.50
    18 GFF3781 Transcriptional regulator, AcrR family no 0.50
    19 GFF2551 Endonuclease/exonuclease/phosphatase no 0.50
    20 GFF4606 3-ketoacyl-CoA thiolase [fadN-fadA-fadE operon] (EC 2.3.1.16) no 0.50

    Or look for negative cofitness