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  • Top cofit genes for GFF6256 from Variovorax sp. SCN45

    Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL (EC 2.7.8.37)
    SEED: Phosphonates transport ATP-binding protein PhnL
    KEGG: putative phosphonate transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6474 hypothetical protein no 0.59
    2 GFF4597 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.57
    3 GFF5749 Flagellar motor switch protein FliG no 0.55
    4 GFF5626 Patatin 0.42 0.55
    5 GFF857 no description no 0.53
    6 GFF843 no description no 0.53
    7 GFF5598 putative phospholipase D family protein no 0.53
    8 GFF4238 no description no 0.52
    9 GFF1260 no description no 0.50
    10 GFF3295 Endonuclease/exonuclease/phosphatase family protein no 0.50
    11 GFF1472 Tricarboxylate transport protein TctC no 0.49
    12 GFF1130 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.49
    13 GFF5994 Chlorogenate esterase no 0.48
    14 GFF6111 Oligopeptide ABC transporter, ATP-binding protein OppF (TC 3.A.1.5.1) no 0.48
    15 GFF5940 T6SS associated component TagJ (ImpE) no 0.48
    16 GFF786 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system no 0.47
    17 GFF6222 T6SS component TssM (IcmF/VasK) no 0.47
    18 GFF6200 integral membrane sensor signal transduction histidine kinase no 0.47
    19 GFF2770 BUG/TctC family periplasmic protein no 0.47
    20 GFF1323 Methionine aminopeptidase (EC 3.4.11.18) no 0.47

    Or look for negative cofitness