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  • Top cofit genes for GFF6248 from Variovorax sp. SCN45

    Site-specific recombinase
    SEED: Site-specific recombinase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3091 Septum-associated cell division protein DedD no 0.57
    2 GFF6708 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.56
    3 GFF4660 hypothetical protein no 0.54
    4 GFF2449 Beta-ureidopropionase (EC 3.5.1.6) no 0.53
    5 GFF619 Aspartate carbamoyltransferase (EC 2.1.3.2) no 0.52
    6 GFF833 Proteins containing SET domain no 0.51
    7 GFF5078 Uncharacterized protein CbuG_0353 no 0.50
    8 GFF1219 SAM-dependent methyltransferase no 0.50
    9 GFF7160 hypothetical protein no 0.50
    10 GFF596 no description no 0.50
    11 GFF5422 putative membrane protein 0.39 0.50
    12 GFF5101 Dihydroxy-acid dehydratase (EC 4.2.1.9) no 0.49
    13 GFF89 hypothetical protein no 0.49
    14 GFF1690 KEGG: DNA-binding protein H-NS no 0.48
    15 GFF5203 hypothetical protein no 0.48
    16 GFF1932 no description no 0.48
    17 GFF3532 Two-component system response regulator QseB no 0.48
    18 GFF2237 Intracellular protease no 0.47
    19 GFF5097 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10) no 0.47
    20 GFF3593 Phosphoenolpyruvate synthase (EC 2.7.9.2) no 0.47

    Or look for negative cofitness